Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927575.1_cds_XP_016475335.1_67274
CDS Infomation

[gene=LOC107797017] [db_xref=GeneID:107797017] [protein=uncharacterized WD repeat-containing protein C17D11.16-like] [protein_id=XP_016475335.1] [location=complement(join(9600..9683,9785..9862,10006..10068,10168..10197,10283..10426,10802..10900,11014..11088,11342..11438,11529..11599,12715..12780,12854..12912,13686..13812,13915..14010,14096..14172,14594..14793,15274..15392))] [gbkey=CDS]
Sequence

ATGATAGCAGCTATTTCGTGGGTTCCCAAAGGGGTTGCAAAGCCAGTTCCAGCTGCGGCT
GAGCCCCCTTCAAAGGAAGAAATTGAGGAGCTTTTGAAGTGTGGCCTCCTTGATAAAAGT
GAAGATAGTGATAATGAGGAAGCTGAAGAAGATATGAATGTTGATGAATCCAAGGAAAAC
GAGGATGATGAAGTTGCTGTTGCATTAGCAGCTGCTAATGCACTTGGAAAAGCCACAAAA
GATGTCTCTCTAGGAACCGATAACATAACAAATGGTTTAAAGGAATTGAATATGGAAAAC
TACGATGATGAGGAGGATGGCATTGAGCTTTTCGGTTCGGGACTCAAAGACTTGTACTAC
CCAAGTAATGACATGGACCCATATCTCAAGGATAAGGACAATGACTCAGAGGAGGATGAG
GACATGACAATAAAGCCTGATGATTCTATTATAGTTTGTGCAAGCAATGATGACGATGTC
AGTCATCTTGAGATCTGGATTTTGGAAGTTTTATCAGATGGTACTGTAAACATGTATGTT
CATCATGAGATTATTATTCCTGCGTTTCCTCTCTGCACAGCATGGATCGATTGCCCTATT
AAAAGTGACGAGGGGAAAGGGAACTTCATAGCTGTGGGCTCAATGGAACTAGCAATTGAA
ATTTGGGACCTAGACATATTGGATGAGGTGCAACCAGCTGCTGTATTAGGTGGAATCGCT
GACATAAAGAAAAAGGGGAAGAAGAAAACCATCAAATACAAAAAGGATAGCCACTCCGAT
TCAGTACTTGGTCTCGCTTGGAACAAGGAATACAGGAATATGCTTGCCAGTGCTAGTGCT
GATCAATCAGTCAAGGTTTGGGATGTGAATACCAGAAGCTGTACTGTCACTATGAACGAC
CATACTGACAAGGTTCAAGCAGTTGCATGGAATCCATTTGCATCACAGATTCTCCTGAGC
GGGTCATTCGATCATACAGTTTGCATGAAGGATGTGAGGTATCCATCTCACAGTGGATAT
AAGTTTCCAGTTTCTGCTGACGTTGAAAGCTTGGCTTGGGATCCACATTCTGAGCATTCA
TTTGTGGTCAGCTTGGAGAATGGTACAGTTACTAGTTTTGATATCCGTGCTGCTAGTTCT
GATTCGAGTTCTGCGACAAAGCCAAGTTTCACCATCCATGCTCATGATAAAGCAGTGTCC
TCGATGTCCTTTAATCCTCTAGTCCCGAATCTTCTTGCAACTGGTTCCACGGACAAGATG
GTTAAACTATGGGATTTGAGCAACAATCAACCTTCTTGTATTGCATCAAGGAATCCAAAA
GCCGGAGCTGTCTTCTCGGTTTCCTTCTCAGATGATTCCCCCTTTTTTCTTGCTATTGGT
GGTTCTAAAGGGAAGTTGCAGCTATGGGATGTTTCTTCAGAAGATGCGGTGTTGAAGAAA
TATGGGAAATATGTCACGCAAAAAGGGCCGTTGCCCAAATCATAA

Peptide Sequence

PEP ID

XP_016475335.1
PEP Infomation

PREDICTED: uncharacterized WD repeat-containing protein C17D11.16-like [Nicotiana tabacum]
Sequence

MIAAISWVPKGVAKPVPAAAEPPSKEEIEELLKCGLLDKSEDSDNEEAEEDMNVDESKEN
EDDEVAVALAAANALGKATKDVSLGTDNITNGLKELNMENYDDEEDGIELFGSGLKDLYY
PSNDMDPYLKDKDNDSEEDEDMTIKPDDSIIVCASNDDDVSHLEIWILEVLSDGTVNMYV
HHEIIIPAFPLCTAWIDCPIKSDEGKGNFIAVGSMELAIEIWDLDILDEVQPAAVLGGIA
DIKKKGKKKTIKYKKDSHSDSVLGLAWNKEYRNMLASASADQSVKVWDVNTRSCTVTMND
HTDKVQAVAWNPFASQILLSGSFDHTVCMKDVRYPSHSGYKFPVSADVESLAWDPHSEHS
FVVSLENGTVTSFDIRAASSDSSSATKPSFTIHAHDKAVSSMSFNPLVPNLLATGSTDKM
VKLWDLSNNQPSCIASRNPKAGAVFSVSFSDDSPFFLAIGGSKGKLQLWDVSSEDAVLKK
YGKYVTQKGPLPKS

Transcript Sequence

Gene sequence data has not been registered.